Summary
Resource Type
Organism
Abbreviation
A. rhombifolia
Genus
Alnus
Species
rhombifolia
Common Name
White Alder
Description

Order: Fagales
Family: Betulaceae

Cross Reference
Transcriptome
NameProgramDate Constructed
de novo White Alder (Alnus rhombifolia)Trinity, built under bowtie-1.0.1 and samtools-0.1.19; CD-HIT-ESTFeb 18th, 2016
Analysis Details
Provides detailed information on the programs used to assemble and annotate the data.
NameProgramDate Constructed
Interpro Analysis of White Alder (Alnus rhombifolia)InterProScanMar 1st, 2016
White Alder (blastx against TrEMBL)blastxMar 1st, 2016
White Alder (blastx against sprot)blastxMar 1st, 2016
de novo White Alder (Alnus rhombifolia)Trinity, built under bowtie-1.0.1 and samtools-0.1.19; CD-HIT-ESTFeb 18th, 2016
Biological Samples
NameTissueTreatmentDescription
WA1Not setNot setWhite Alder - pooled seedling leaf RNAs from ozone treatments